Archives: 10/2011

gps25tpj Biosensor Measures Lipids to Track Disease at the Cellular Level
Lipids help regulate important cellular processes such as cell proliferation and immune response. Problems with lipid signalling have been linked with a number of diseases including cancer, diabetes, autoimmune diseases, and inflammatory conditions. “Lipid molecules on cell membranes can act as switches that turn on or off protein-protein interactions affecting all cellular processes, including those associated with disease,” explains Wonhwa Cho, a chemistry professor at the University of Illinois at Chicago. “While the exact mechanism is still unknown, our hypothesis is that lipid molecules serve sort of like a sliding switch.” Cho adds that it is “not just the presence of lipid, but the number of lipid molecules that are important for turning on and off biological activity.”

Up until now, however, there hasn’t been a method of quantitatively tracking lipids within living cells. To remedy that problem, Cho led a team of researchers at the university in the development of a biosensor that uses modified proteins to fluoresce and act as sensors for lipid levels.

As the press release explains:

While visualizing lipid molecules with fluorescent proteins isn’t new, Cho’s technique allows quantification by using a hybrid protein molecule that fluoresces only when it binds specific lipids. His lab worked with a lipid known as PIP2 — an important fat molecule involved in many cellular processes. Cho’s sensor binds to PIP2 and gives a clear signal that can be quantified through a fluorescent microscope.

The result is the first successful quantification of membrane lipids in a living cell in real time.

“We had to engineer the protein in such a way to make it very stable, behave well, and specifically recognizes a particular lipid,” Cho said. He has been working on the technique for about a decade, overcoming technical obstacles only about three years ago.

Cho hopes now to create a tool kit of biosensors to quantify most, if not all lipids.

“We’d like to be able to measure multiple lipids, simultaneously,” he said. “It would give us a snapshot of all the processes being regulated by the different lipids inside a cell.”

Abstract in Nature Chemistry: In situ quantitative imaging of cellular lipids using molecular sensors

Press release: New membrane lipid measuring technique may help fight disease

Here’s a three minute HP ad that promotes computer workstations, but gives a look into the operations of AMP’D Gear, a small company that designs prostheses for unusual activities for amputees to be partaking in, like rock climbing and swimming.

Link: AMP’D Gear…

Art

c709e64x Send Your Secret Message Hidden in Bacteria
Walt et al from Tufts University describe a method of sending timed and on-demand released messages using printed arrays of bacteria. Or as they call it: Steganography by Printed Arrays of Microbes (SPAM). The researchers published their results in Proceedings of the National Academy of Sciences. The system they describe uses genetically engineered strains of Escherichia coli with added fluorescent proteins. These living organisms can carry a message and release the information when conditions selected prior match the environment. They use 7 strains containing fluorescent proteins of different wavelengths. This provides a septenary numeral system that can be translated into text.

The sender encodes a message using a septenary code. Bacteria are printed on an agar plate and copied on a nitrocellulose membrane. The membrane is sealed and sent by post to the receiver. As long as the proteins are not expressed, the message will not be visible. The recipient stamps the membrane on agar which enables the bacteria to grow and form colonies again. When the appropriate inducer is added, the fluorescent proteins will be expressed and the colonies can be read by measuring the fluorescent reflection.

Several methods are described to secure the secret message. Bacteria tend to lose their extra genetic information (fluorescence) without selective pressure. The fluorescent proteins are added to the genome of E. Coli together with an antibiotic resistance gene. This creates a selective pressure and only bacteria that contain the resistance gene, and thus the fluorescent protein, will survive when grown on a plate with antibiotics. With no appropriate antibiotics the bacteria will lose their fluorescent properties and the message will be lost. Also the inducer, which in the experiments was IPTG, should be known by the receiver to express the fluorescent proteins. Without the proper inducers the proteins will not be expressed by E. coli as they are not essential for their growth.

Every code can be cracked, and some options to reveal the code include sequencing the genomes or running a molecular test like PCR looking for known fluorescent protein genes. The Tufts team is not the first hiding secret messages in bacteria. Craig Venter, known for sequencing the first whole human genome, once embedded the names of three authors of their publication in a synthetic genome of Mycoplasma genitalium as a watermark.

Abstract in PNAS: InfoBiology by printed arrays of microorganism colonies for timed and on-demand release of messages

(hat tip: Wired)

Image: Walt et al./PNAS

bswe45gx1 Monkey See, Monkey Do, Monkey Feel: Duke Univeristy Researchers Demonstrate Two Way Brain Machine Interface   Researchers from Duke University Center for Neuroengineering have developed the first two-way interface between a brain and a machine. The experiment, which was published in the journal Nature, describes how the novel brain-machine-brain interface was demonstrated between monkeys and their on-screen avatars.

Two monkeys were trained to use the electrical activity in their motor cortex to control the arm of an onscreen avatar without physically moving themselves. When the monkeys placed the avatar’s virtual arm over one of three objects, tactile feedback was provided via continuous electrical stimulation to the monkey’s primary tactile cortex, which the monkey’s interpreted as texture. A different electrical stimulus was fed back depending on which object the virtual arm was placed over, providing the monkeys with the impression of different textures for the different objects. The monkeys were then trained to detect the same object from a repeated set of tests based on it’s texture alone.

From the Nature press release:

A major challenge, the authors say, was to keep the sensory input and the motor output from interfering with each other, because the recording and stimulating electrodes were placed in connected brain tissue. The researchers solved the problem by alternating between a situation in which the brain–machine–brain interface was stimulating the brain and one in which motor cortex activity was recorded; half of every 100 milliseconds was devoted to each process.

“This enforces some constraints on the exchange of information between the sensory and motor areas,” says neuroscientist Stefano Panzeri of the Italian Institute of Technology in Genoa, who was not involved in the study. But because the animals learn to use the information, this experiment shows that the brain can exchange information even under these constraints, he explains.

This bidirectional communication is a critical step in the development of brain–machine interfaces, says Rodrigo Quian Quiroga, a neuroscientist at the University of Leicester, UK who was also not involved in the study. Previous brain–machine interfaces have relied on visual feedback, a less-than-ideal situation for someone trying to use a robotic prosthetic, he says. “If you want to reach and grasp a glass, visual feedback won’t help you,” says Quian Quiroga. “It’s the sensory feedback that tells you if you have a good grip or if you are about to drop it.”

This early experimental work is part of a larger project to develop prosthetic technology capable of restoring motor control and tactile feedback to spinal cord injured patients.

Abstract in Nature: Active tactile exploration using a brain–machine–brain interface

Duke University press release…

Nature journal press release…

xsm35ad6 GE’s Discovery MR750w Wide Bore MRI System Makes MRIs More Pleasant for PatientsHere’s another device designed to accommodate those who are battling at the front lines of the obesity epidemic. GE Healthcare has announced FDA 510(k) clearance of its Discovery MR750w wide bore MRI system. The 3.0 Tesla system has a 70cm bore and uses GE’s GEM (Geometry Embracing Method) coils to improve patient comfort by reducing the need for repositioning.

The MR750w also incorporates soothing LED lighting which GE claims can help ease the anxiety many patients feel during imaging.

Some additional features from the product page:

  • High Resolution In-Room Operator Control (IROC) – Fast exam set-up with high-resolution color console mounted on the front of the magnet. Easy to see patient, system and scan information, and control and select parameters in real time right in the room.
  • Sleek dual-sided controls – Control the scanner from either side of the table. Simplify patient set-up with easy access to cardiac or peripheral gating leads and IV lines.
  • IntelliTouch Patient Positioning – Boost exam productivity with IntelliTouch patient positioning, by eliminating the need for laser alignment and reducing the steps to position patients in as little as 30 seconds.
  • Sophistical LED accent lights – The parenthesis accent lights on the sides of the Discovery MR750w not only enhance the overall aesthetic beauty of the system, they resemble the caring hands metaphor of embracing the patient in a comfortable experience.

Press release: GE Healthcare Receives FDA Clearance of Discovery MR750w 3.0T with GEM Suite of Coils

Product page: Discovery MR750w 3.0T

Flashback: GE Healthcare’s GEM Coil Design Provides Greater MRI Scanning Coverage

8jpzhb9k ePetri: a Smartphone Based Petri DishEngineers from the California Institute of Technology (CalTech) have unveiled the ePetri dish: a small, lens-free microscopy imaging platform.  The prototype was built using a smartphone, a commercially available cell-phone image sensor and Lego building blocks. The device is described in this week’s Proceedings of the National Academy of Sciences (PNAS).

The culture is placed on an image sensor chip and the phone’s LED screen functions as a scanning light source. The ePetri device is then placed in an incubator, with the image sensor chip connected to a laptop outside the incubator through a cable. The image-sensor takes pictures of the culture, the data is sent to the laptop and so cultures can be monitored as they grow. The technique is apparently particularly useful in the imaging of cells that grow very close to one another.

Instead of using a large, heavy instrument, they now have a lightweight microscope providing high-quality images of cells. The ePetri is able to monitor the entire field, but can still zoom in on areas of interest within the culture. The research team sees many possibilities for their technology, such as drug screening and detection of toxic compounds. It could even provide microscopy-imaging capabilities for other portable diagnostic lab-on-a-chip tools. Right now the team is also working on a more comprehensive system that would include a small incubator, transforming the ePetri into a desktop diagnostic tool.

Here you can see how the ePetri prototype works:

Link:  Caltech Engineers Build Smart Petri Dish

8q5n613w UC Davis Researchers Develop Self Cleaning ClothResearchers at the University of California, Davis have developed a special self-cleaning fabric that rids itself of pesticides and bacteria when exposed to light.

The new cotton fabric incorporates a novel compound, known as 2-anthraquinone carboxylic acid, or 2-AQC. Unlike other antimicrobial agents, 2-AQC bonds strongly to cellulose found in cotton, making it difficult to wash off. Moreover, 2-AQC doesn’t affect the properties of the cotton itself. When 2-AQC is exposed to light, it produces antimicrobial compounds such as hydroxyl radicals and hydrogen peroxide, which instantly kill bacteria and break down organic compounds and toxins.

The new fabric may soon be found in the clothing of healthcare workers, farmers, and military personnel. It could also give us another reason to love sun dried laundry!

From UC Davis: Self-cleaning cotton breaks down pesticides, bacteria

Article in Journal of Materials Chemistry: Photo-induced self-cleaning functions on 2-anthraquinone carboxylic acid treated cotton fabrics

qyah3509er Siemens Mobilett Mira Wireless Digital X ray System Coming to U.S.

Siemens won FDA clearance for its slick looking Mobilett Mira mobile X-ray system.  It features a wireless detector, turning any patient room into a flexible X-ray suite.

There’s also the option of having the device have a giraffe design for use with kids.

Wireless detector

Whether daily handling or image data transfer, Mobilett Mira gives you wireless flexibility. The result: safer operation, fast digital data transfer, no cables to trip over. The image quality is comparable to that of high-end stationary systems.

• Seamless integration of wireless technology
• Outstanding detector resolution
• Complete imaging freedom in your daily routine

Rotating swivel arm033wglp60b Siemens Mobilett Mira Wireless Digital X ray System Coming to U.S.

Thanks to its industry-leading arm range and its counterbalanced design, the rotating swivel arm lets you examine every region of interest in every position and from almost every angle. The fully integrated cable design ensures greater sterility.

• Industry-leading arm range
• New degree of freedom by means of lateral arm rotation
• Hygienic design due to integrated cables

Highest imaging power per footprintx846mhwc Siemens Mobilett Mira Wireless Digital X ray System Coming to U.S.

With Mobilett Mira you get the highest imaging power in the smallest space. The high output power gives you pin-sharp images, comparable to high-end stationary systems. The WLAN detector provides first-class image quality under any conditions.

• High imaging output for stationary-like images
• Excellent image quality in a compact system
• High-resolution FD for low dose applications

UPTIME Services

Mobilett Mira is reliable and always up-to-date. Not just in daily use, but also in data security. Regular anti-virus updates protect you against malware. Siemens Remote Services ensures uninterrupted system availability, online and at your facility.

• Virus protection
• Remote Diagnosis
• Remote Update Handling

Virtually unlimited power, battery-saving, giraffe design

Mobilett Mira provides virtually unlimited power with a single central charging mechanism for the detector and system batteries. The ECO-Mode lets you use up to 25 percent less energy. The friendly giraffe design creates a relaxed atmosphere.

• Detector and system batteries recharge automatically
• Battery-saving ECO-Mode to use up to 25% less energy
• Friendly and colorful giraffe design

Press release: Siemens Mobilett Mira Mobile Digital X-ray System Receives FDA Clearance

Product page: Mobilett Mira

Flashback: Mobilett Mira Mobile Wireless X-ray from Siemens

uicxjlgg FDA Releases Blueprint for Driving Biomedical InnovationA report just released by the Commissioner of the Food & Drug Administration (FDA), Dr. Margaret Hamburg, aims to provide immediate steps to quicken biomedical innovation.

Entitled “Driving Biomedical Innovation: Initiatives to Improve Products for Patients,” the 37-page blueprint briefly touches upon a number of important topics, including how to build the infrastructure to drive and support personalized medicine as well as what the FDA anticipates to be the future of medical devices (e.g. in terms of regulation).

According to the FDA press release, the blueprint focuses on:

• rebuilding FDA’s small business outreach services
• building the infrastructure to drive and support personalized medicine
• creating a rapid drug development pathway for important targeted therapies
• harnessing the potential of data mining and information sharing while protecting patient privacy
• improving consistency and clarity in the medical device review process
• training the next generation of innovators
• streamlining and reforming FDA regulations.

To access the full report, please visit the FDA report page. It is worth the quick read, though hopefully more details about each of these topics will come out soon.

Press release: FDA commissioner outlines steps to spur biomedical innovation, improve health of Americans