Archives: 6/2010

silk biochip Silk Woven into Bio Chip of the FutureInterest in silk has been growing within the biomedical engineering community in recent years, thanks to the remarkable properties of silk proteins and fibers. Silk is strong and durable, can be engineered to be non-immunogenic, and is completely resorbable. We have covered several novel applications of silk in medicine previously, including neural electrode interfaces, nerve repair, bioelectronics, and tissue scaffoling.
Most recently, silk has been incorporated into biosensors. Peter Domachuk, a physicist at the University of Sydney, conceived of using silk as a biosensor component while working with Fiorenzo Omenetto and David Kaplan at Tufts University in Boston. In principle, various biochemically reactive proteins may be embedded in silk fibers, which may then be assembled into “bio-chips”. As a proof-of-concept, Dr. Domachuk and his team have successfully created an oxygen sensor by embedding hemoglobin proteins within silk fibers. In the future, the group hopes to embed a broad range of proteins within a single chip, enabling the simultaneous testing of several parameters at the bedside.
More from the University of Sydney press release:

The protein that underpins the strength of silk, fibroin, can be purified to form a clear material that can be used to display tiny drops of thousands of different biochemical compounds in patterns where they are no farther apart than the width of a human hair. These test compounds can then be simultaneously exposed to and react with body fluids such as human blood.
“The particularly interesting thing about silk,” Peter says, “is that the biochemical compounds it holds retain their activity. This biochemical activity enables extra sensitivity for monitoring and detecting medical conditions. And fibroin is transparent and can be formed into structures to control light which can be then used as a sensitive probe for improved medical testing. What’s more, silk doesn’t trigger the human immune response when it comes into contact with tissue.”
The above combination of factors makes silk a unique candidate for implantable biochips – devices like electronic microchips that can sit in or under the skin and detect chemicals in the blood. This can allow quick and accurate determination of medical conditions without the need for expensive laboratory-based pathology.

Link: Silk microchip for rapid medical testing…

030900 1 Roche xCELLigence System Reduces the Need for Animal Testing, Lab Rats Rejoice
Currently, when a pharmaceutical company wants to test the toxicity of drug candidate chemicals, they turn to in vivo tests on living animals. However, a new study performed by Roche Pharma and Roche Applied Science details a method for testing hepatotoxicity which could potentially reduce the cost of cytotoxicity testing and spare many animal lives in the future. This new method uses Roche’s xCELLigence system, which can determine the toxicity of a compound through biochemical assays and gene expression analysis. Unlike in vivo testing, the xCELLigence system can also provide quantitative cell analysis in real time.
From the xCELLigence product page:

The xCELLigence System monitors cellular events in real time without the incorporation of labels. The System measures electrical impedance across interdigitated micro-electrodes integrated on the bottom of tissue culture E-Plates.
The impedance measurement provides quantitative information about the biological status of the cells, including cell number, viability, and morphology. A wide range of cell-based assays for both high throughput screening and research laboratory environments can be performed on the xCELLigence System.


Product page: xCELLigence System…
Press release: Reducing Animal Testing: Real-time Cell Analysis with Roche’s xCELLigence System for the Early Detection of Hepatic Cytotoxicity…

6346d CelluliteDX Genetic Test Somewhat Predicts Your Chances of Getting CelluliteNowadays genetic tests are flooding the market and many companies are trying to secure a piece of the pie including DermaGenoma (Irvine, CA). Claiming to bring the genetic revolution to dermatology, they have released a genetic test that predicts the risk of getting moderate to severe cellulite (or more specifically Nurnberger-Muller grade 2 or greater cellulite) for women. It tests for a variant of the angiotensin I-converting enzyme (ACE) gene located on chromosome 17. Given the fact that there is not much you can do to prevent it, even a perfect test seems to be of dubious value. Now, in the female half of our population 65% is affected. From the company’s own computations it turns out that a positive test result means 68% chance of getting cellulite, a whopping 3% increase, while if you test negatively you still have a 53% chance of getting it. While the company acknowledges all of this in its information for physicians, its marketing is more than likely to get at least some patients to persuade their doctors to offer the test.
Product page: CelluliteDX
Press release: Genetic Test Helps Predict Cellulite – Before The Swimsuit Makes You Look Fat…

2010 DBMine Challenge Square logo 2010 DiabetesMine Design Challenge: Meet The WinnersThe DiabetesMine Design Challenge, a competition of ideas to improve the lives of people living with diabetes, is over and the winners have been announced. This year 130 submissions came in from diabetics, university groups, professional designers, and just average people with good ideas. We were happy to participate in the judging and would like to congratulate the winners.
LINK: 2010 DiabetesMine Design Challenge Winners…

hj3y62ve Microbubbles Help Trap, Remove Toxic Carbon NanotubesCarbon nanotubes are already a major tool in bioscience research. In addition, these particles are finding themselves as a central component for production of variety of consumer products, from cosmetics to specialized plastics. Because of their intrinsic toxicity, though, there are still numerous questions about the safety of carbon nanotubes and how they’re processed by the human body.
Nanowerk has recently spotlighted work by Indian scientists at Tata Institute of Fundamental Research in Mumbai that created a method that uses optical tweezers to remove carbon nanotubes out of body fluids.

"We have succeeded in using a low-power infrared laser in an optical tweezers set-up to generate micro-bubbles in flowing, biologically-relevant fluids, including human whole blood," Deepak Mathur, a Senior Professor in Atomic & Molecular Sciences at the Tata Institute of Fundamental Research in Mumbai, tells Nanowerk. "These micro-bubbles are formed upon very localized heating of small bundles of carbon nanotubes that are suspended in the flowing fluid. The localized nature of the heating causes enormous temperature gradients to be set up in the fluid and these, in turn, set up surface tension gradients that give rise to complex flow patterns in the immediate vicinity of the microbubble. A consequence of this is that proximate CNTs are attracted towards the microbubble and appear to "adhere" to the bubble surface."

Read on at Nanowerk: Microbubble scavengers can remove carbon nanotubes from the body…
Abstract in Nanotechnology: Optical-tweezer-induced microbubbles as scavengers of carbon nanotubes

6622334 New 12th Edition of Daviss Drug Guide Out on UnboundUnbound Medicine has released the 12th edition of Davis’s Drug Guide for its mobile and online platform. The new edition is updated with the latest info on drugs, supplements, and drug epidemiological data.
Features from the product page:

  • Almost 2,000 monographs and 5,000 trade and generic drugs
  • Appendices with dose calculations, lab values, and more
  • Details of IV administration, dilution, and concentration
  • Common herbal and natural products
  • New information on psychotropic drugs
  • Joint Commission guidelines on pain management
  • High-alert notices and patient safety information
  • Drug-drug, drug-natural, and drug-food interactions
  • Product page: Davis’s Drug Guide for Mobile and Web…

    mv9lz97i Artificial Plastic Antibody Shows Efficacy Against Real Antigen
    Researchers from UC Irvine, Stanford, and Japan’s University of Shizuoka have successfully tested the first antibody that’s actually made out of plastic. The artificial antibody injected into laboratory mice targeted melittin, the toxin found in bee venom.
    From an announcement by the American Chemical Society:

    The scientists mixed melittin with small molecules called monomers, and then started a chemical reaction that links those building blocks into long chains, and makes them solidify. When the plastic dots hardened, the researchers leached the poison out. That left the nanoparticles with tiny toxin-shaped craters.
    The scientists gave lab mice lethal injections of melittin, which breaks open and kills cells. Animals that then immediately received an injection of the melittin-targeting plastic antibody showed a significantly higher survival rate than those that did not receive the nanoparticles.

    Press release: Plastic antibody works in first tests in living animals…
    Abstract in Journal of The American Chemical Society: Recognition, Neutralization, and Clearance of Target Peptides in the Bloodstream of Living Mice by Molecularly Imprinted Polymer Nanoparticles: A Plastic Antibody

    34341 Brain Surgery Through an EyelidIn the continuing effort to make surgery less invasive, physicians at Johns Hopkins Hospital are operating on the brain through a tiny incision in one of the eyelids instead of lifting a large piece of the skull. Named transpalpebral orbitofrontal craniotomy, the procedure allows for access to the middle and front regions of the brain. The cranial cavity is reached through a hole created by removing a small, half-inch to one-inch-square section of skull bone right above the eyebrow. Endoscopic surgery can then be performed with help of previously obtained CT and MRI data. Afterwards, the dural defect is closed with a graft and the piece of bone is placed back in its original position. The procedure is shorter, less invasive and has fewer complications than conventional surgery. Because the incision is made in a natural crease of the eyelid, the resulting scar is hardly visible. So far the surgeons have performed repair of persistent cerebrospinal fluid leaks and pneumocephalus, and biopsy and resection of midline brain tumors in a total of seven patients.
    Press release: Shortcut Through Eyelid Gives Surgeons Less-Invasive Approach to Fix Brian Fluid Leaks and Remove Tumors Near Front of Skull…
    Article abstract: Transpalpebral Orbitofrontal Craniotomy: A Minimally Invasive Approach to Anterior Cranial Vault Lesions…
    Image credit: l@mie

    jv500iyq GE Gets Grant (Like It Needs a Grant) For New Fluorescent Nerve Imaging SystemThe National Institutes of Health have awarded a $4 million grant to GE Global Research for further development of the company’s prototype fluorescent nerve labeling agent and imaging system. GE hopes the system will help surgeons prevent damage to nerve endings during prostate surgery by making the nerves more easily visible.
    From the press release:

    GE’s nerve labeling agent, developed by a team of biologists and chemists in the Research Center’s Biosciences labs, is a fluorescent small molecule that localizes to myelin. Myelin is a major component of motor nerves and clinically important sensory nerves, such as the cavernous nerves of the prostate. This agent then fluoresces, or lights up under an optical imaging system developed in tandem by a group of biomedical engineers in GE’s Research labs.

    Image: The nerve glows reddish-orange with GE’s fluorescent labeling agent. The imaging agent exhibits some partitioning to fat tissue, where it glows with a greenish color. Note that the surrounding tissue, such as muscle, is dark. The image above is captured using a fluorescent imaging system with a colored camera.
    Press release: GE Awarded $4 Million Grant from National Institutes of Health to Develop Fluorescent Nerve Imaging Agent and Surgical System….